MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4030_ses-1_T1w.
  • Date and time: 2022-12-06, 16:20.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.751724898558841
cnr1.81677455199082
efc0.6291333071213844
fber1739.414934715634
fwhmavg4.2149366666666666
fwhmx4.0309
fwhmy4.79379
fwhmz3.82012
icvscsf0.19575261285812087
icvsgm0.4246005092251705
icvswm0.37964687791670865
inumed1.8144010305404663
inurange0.8347824156284331
qi10.0
qi20.003892954613581284
rpvecsf26.652620260618008
rpvegm13.098510527007067
rpvewm17.168507483723538
sizex176
sizey256
sizez256
snrcsf2.881544700955365
snrgm9.22463483562726
snrtotal10.2571192008974
snrwm18.665178066109572
snrdcsf29.60614570029419
snrdgm64.1846865452663
snrdtotal57.60824075333063
snrdwm79.03389001443139
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk3.164703014977711
summarybgmad8.28981884843986
summarybgmean18.55604995276331
summarybgmedian17.081413194537163
summarybgn2064606.0
summarybgp058.29493086785078
summarybgp9534.224270321428776
summarybgstdv8.618830801910876
summarycsfk8.718836213294063
summarycsfmad109.95397087985616
summarycsfmean410.6777858197706
summarycsfmedian374.623655565083
summarycsfn24257.0
summarycsfp05255.96313340216875
summarycsfp95658.0645155161619
summarycsfstdv130.00524801549406
summarygmk-0.11649800414151779
summarygmmad89.04722993791168
summarygmmean818.3110661236764
summarygmmedian812.1658978611231
summarygmn22674.0
summarygmp05685.2841775491834
summarygmp95975.5453139916062
summarygmstdv88.04120732205652
summarywmk0.12450792893165108
summarywmmad52.19852967204439
summarywmmean1002.7956943678003
summarywmmedian1000.0614430010319
summarywmn220472.0
summarywmp05918.0952372401953
summarywmp951094.8694306239486
summarywmstdv53.57887138581594
tpmoverlapcsf0.16684822738170624
tpmoverlapgm0.4531848132610321
tpmoverlapwm0.503866970539093
wm2max0.6009452075025845
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime17:22:39.235000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0488089, 0.95013, 0.308011, 0.0074964, 0.308022, -0.95135]
ImageOrientationTextSag>Cor(2.8)>Tra(0.5)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0329976
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2640, 5455, -7472, 337, -52, -932, 44, -152]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp232.23
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumc6a3c1e1e4277948409d52588902e95f
softwaremriqc
version0.16.1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.